Michael Huber
Frequency matters: comparison of drug resistance mutation detection by Sanger and next-generation sequencing in HIV-1.
Balakrishna S, Loosli T, Zaheri M, Frischknecht P, Huber M, Kusejko K, Yerly S, Leuzinger K, Perreau M, Ramette A, Wymant C, Fraser C, Kellam P, Gall A, Hirsch H, Stoeckle M, Rauch A, Cavassini M, Bernasconi E, Notter J, Calmy A, Günthard H, Metzner K, Kouyos R. Frequency matters: comparison of drug resistance mutation detection by Sanger and next-generation sequencing in HIV-1. J Antimicrob Chemother 2023; 78:656-664.
02.03.2023Frequency matters: comparison of drug resistance mutation detection by Sanger and next-generation sequencing in HIV-1.
02.03.2023J Antimicrob Chemother 2023; 78:656-664
Balakrishna Suraj, Loosli Tom, Zaheri Maryam, Frischknecht Paul, Huber Michael, Kusejko Katharina, Yerly Sabine, Leuzinger Karoline, Perreau Matthieu, Ramette Alban Nicolas, Wymant Chris, Fraser Christophe, Kellam Paul, Gall Astrid, Hirsch Hans H., Stoeckle Marcel, Rauch Andri, Cavassini Matthias, Bernasconi Enos, Notter Julia, Calmy Alexandra, Günthard Huldyrich F, Metzner Karin J, Kouyos Roger D
Quantifying and predicting ongoing Human Immunodeficiency Virus Type 1 (HIV-1) transmission dynamics in Switzerland using a distance-based clustering approach.
Labarile M, Loosli T, Zeeb M, Kusejko K, Huber M, Hirsch H, Perreau M, Ramette A, Yerly S, Cavassini M, Battegay M, Rauch A, Calmy A, Notter J, Bernasconi E, Fux C, Günthard H, Pasin C, Kouyos R. Quantifying and predicting ongoing Human Immunodeficiency Virus Type 1 (HIV-1) transmission dynamics in Switzerland using a distance-based clustering approach. J Infect Dis 2022
26.11.2022Quantifying and predicting ongoing Human Immunodeficiency Virus Type 1 (HIV-1) transmission dynamics in Switzerland using a distance-based clustering approach.
26.11.2022J Infect Dis 2022
Labarile Marco, Loosli Tom, Zeeb Marius, Kusejko Katharina, Huber Michael, Hirsch Hans H, Perreau Matthieu, Ramette Alban, Yerly Sabine, Cavassini Matthias, Battegay Manuel, Rauch Andri, Calmy Alexandra, Notter Julia, Bernasconi Enos, Fux Christoph, Günthard Huldrych F, Pasin Chloé, Kouyos Roger D
A Systematic Molecular Epidemiology Screen Reveals Numerous Human Immunodeficiency Virus (HIV) Type 1 Superinfections in the Swiss HIV Cohort Study.
Chaudron S, Leemann C, Kusejko K, Nguyen H, Tschumi N, Marzel A, Huber M, Böni J, Perreau M, Klimkait T, Yerly S, Ramette A, Hirsch H, Rauch A, Calmy A, Vernazza P, Bernasconi E, Cavassini M, Metzner K, Kouyos R, Günthard H, Swiss HIV Cohort Study. A Systematic Molecular Epidemiology Screen Reveals Numerous Human Immunodeficiency Virus (HIV) Type 1 Superinfections in the Swiss HIV Cohort Study. J Infect Dis 2022; 226:1256-1266.
28.09.2022A Systematic Molecular Epidemiology Screen Reveals Numerous Human Immunodeficiency Virus (HIV) Type 1 Superinfections in the Swiss HIV Cohort Study.
28.09.2022J Infect Dis 2022; 226:1256-1266
Chaudron Sandra E, Leemann Christine, Kusejko Katharina, Nguyen Huyen, Tschumi Nadine, Marzel Alex, Huber Michael, Böni Jürg, Perreau Matthieu, Klimkait Thomas, Yerly Sabine, Ramette Alban, Hirsch Hans H, Rauch Andri, Calmy Alexandra, Vernazza Pietro, Bernasconi Enos, Cavassini Matthias, Metzner Karin J, Kouyos Roger D, Günthard Huldrych F, Swiss HIV Cohort Study
Similar But Different: Integrated Phylogenetic Analysis of Austrian and Swiss HIV-1 Sequences Reveal Differences in Transmission Patterns of the Local HIV-1 Epidemics.
Kusejko K, Tschumi N, Chaudron S, Nguyen H, Battegay M, Bernasconi E, Böni J, Huber M, Calmy A, Cavassini M, Egle A, Grabmeier-Pfistershammer K, Haas B, Hirsch H, Klimkait T, Öllinger A, Perreau M, Ramette A, Flury B, Sarcletti M, Scherrer A, Schmid P, Yerly S, Zangerle R, Günthard H, Kouyos R. Similar But Different: Integrated Phylogenetic Analysis of Austrian and Swiss HIV-1 Sequences Reveal Differences in Transmission Patterns of the Local HIV-1 Epidemics. J Acquir Immune Defic Syndr 2022; 90:e4-e12.
01.08.2022Similar But Different: Integrated Phylogenetic Analysis of Austrian and Swiss HIV-1 Sequences Reveal Differences in Transmission Patterns of the Local HIV-1 Epidemics.
01.08.2022J Acquir Immune Defic Syndr 2022; 90:e4-e12
Kusejko Katharina, Tschumi Nadine, Chaudron Sandra E, Nguyen Huyen, Battegay Manuel, Bernasconi Enos, Böni Jürg, Huber Michael, Calmy Alexandra, Cavassini Matthias, Egle Alexander, Grabmeier-Pfistershammer Katharina, Haas Bernhard, Hirsch Hans, Klimkait Thomas, Öllinger Angela, Perreau Matthieu, Ramette Alban, Flury Baharak Babouee, Sarcletti Mario, Scherrer Alexandra, Schmid Patrick, Yerly Sabine, Zangerle Robert, Günthard Huldrych F, Kouyos Roger D
Correction to: Identifying and Characterizing Trans Women in the Swiss HIV Cohort Study as an Epidemiologically Distinct Risk Group.
Nguyen H, Hampel B, Nuñez D, Battegay M, Hachfeld A, Bernasconi E, Calmy A, Cavassini M, Vernazza P, Fellay J, Rudolph H, Huber M, Leuzinger K, Perreau M, Scherrer A, Ramette A, Yerly S, Günthard H, Kouyos R, Kusejko K. Correction to: Identifying and Characterizing Trans Women in the Swiss HIV Cohort Study as an Epidemiologically Distinct Risk Group. Clin Infect Dis 2022; 74:2266.
06.07.2022Correction to: Identifying and Characterizing Trans Women in the Swiss HIV Cohort Study as an Epidemiologically Distinct Risk Group.
06.07.2022Clin Infect Dis 2022; 74:2266
Nguyen Huyen, Hampel Benjamin, Nuñez David Garcia, Battegay Manuel, Hachfeld Anna, Bernasconi Enos, Calmy Alexandra, Cavassini Matthias, Vernazza Pietro, Fellay Jacques, Rudolph Hannes, Huber Michael, Leuzinger Karoline, Perreau Matthieu, Scherrer Alexandra, Ramette Alban Nicolas, Yerly Sabine, Günthard Huldrych F, Kouyos Roger D, Kusejko Katharina
Cohort Profile Update: The Swiss HIV Cohort Study (SHCS)
Scherrer A, Wandeler G, Fellay J, Bucher H, Yerly S, Suter F, Hirsch H, Huber M, Dollenmaier G, Perreau M, Martinetti G, Rauch A, Günthard H, Marzolini C, Tarr P, Traytel A, Braun D, Calmy A, Battegay M, Cavassini M, Furrer H, Schmid P, Bernasconi E, Stoeckle M, Kahlert C, Trkola A, Kouyos R, Swiss HIV Cohort Study (SHCS). Cohort Profile Update: The Swiss HIV Cohort Study (SHCS). Int J Epidemiol 2021
07.08.2021Cohort Profile Update: The Swiss HIV Cohort Study (SHCS)
07.08.2021Int J Epidemiol 2021
Scherrer Alexandra U, Wandeler Gilles, Fellay Jacques, Bucher Heiner, Yerly Sabine, Suter Franziska, Hirsch Hans, Huber Michael, Dollenmaier Günter, Perreau Matthieu, Martinetti Gladys, Rauch Andri, Günthard Huldrych F, Marzolini Catia, Tarr Philip, Traytel Anna, Braun Dominique L, Calmy Alexandra, Battegay Manuel, Cavassini Matthias, Furrer Hansjakob, Schmid Patrick, Bernasconi Enos, Stoeckle Marcel, Kahlert Christian, Trkola Alexandra, Kouyos Roger D, Swiss HIV Cohort Study (SHCS)
Identifying and Characterizing Trans women in the Swiss HIV Cohort Study as an Epidemiologically Distinct Risk Group
Nguyen H, Leuzinger K, Perreau M, Scherrer A, Ramette A, Yerly S, Günthard H, Kouyos R, Kusejko K, Huber M, Rudolph H, Fellay J, Hampel B, Nuñez D, Battegay M, Hachfeld A, Bernasconi E, Calmy A, Cavassini M, Vernazza P, Swiss HIV Cohort Study. Identifying and Characterizing Trans women in the Swiss HIV Cohort Study as an Epidemiologically Distinct Risk Group. Clin Infect Dis 2021
20.07.2021Identifying and Characterizing Trans women in the Swiss HIV Cohort Study as an Epidemiologically Distinct Risk Group
20.07.2021Clin Infect Dis 2021
Nguyen Huyen, Leuzinger Karoline, Perreau Matthieu, Scherrer Alexandra, Ramette Alban Nicolas, Yerly Sabine, Günthard Huldrych F, Kouyos Roger D, Kusejko Katharina, Huber Michael, Rudolph Hannes, Fellay Jacques, Hampel Benjamin, Nuñez David Garcia, Battegay Manuel, Hachfeld Anna, Bernasconi Enos, Calmy Alexandra, Cavassini Matthias, Vernazza Pietro, Swiss HIV Cohort Study
Increasing Frequency and Transmission of HIV-1 Non-B Subtypes among Men Who Have Sex with Men in the Swiss HIV Cohort Study
Duran Ramirez J, Kouyos R, Günthard H, Bernasconi E, Vernazza P, Furrer H, Stöckle M, Cavassini M, Yerly S, Ramette A, Perreau M, Hirsch H, Huber M, Chaudron S, Kusejko K, Nguyen H, Ballouz T, Swiss HIV Cohort Study. Increasing Frequency and Transmission of HIV-1 Non-B Subtypes among Men Who Have Sex with Men in the Swiss HIV Cohort Study. J Infect Dis 2021
14.07.2021Increasing Frequency and Transmission of HIV-1 Non-B Subtypes among Men Who Have Sex with Men in the Swiss HIV Cohort Study
14.07.2021J Infect Dis 2021
Duran Ramirez Jessy J, Kouyos Roger D, Günthard Huldrych F, Bernasconi Enos, Vernazza Pietro, Furrer Hansjakob, Stöckle Marcel, Cavassini Matthias, Yerly Sabine, Ramette Alban, Perreau Matthieu, Hirsch Hans H, Huber Michael, Chaudron Sandra E, Kusejko Katharina, Nguyen Huyen, Ballouz Tala, Swiss HIV Cohort Study
Secondary attack rates from asymptomatic and symptomatic influenza virus shedders in hospitals: Results from the TransFLUas influenza transmission study.
Tamò R, Turk T, Böni J, Kouyos R, Schmutz S, Huber M, Shah C, Bischoff-Ferrari H, Distler O, Battegay E, Giovanoli P, Guckenberger M, Kohler M, Müller R, Petry H, Ruschitzka F, McGeer A, Sax H, Weber R, Trkola A, Kuster S. Secondary attack rates from asymptomatic and symptomatic influenza virus shedders in hospitals: Results from the TransFLUas influenza transmission study. Infect Control Hosp Epidemiol 2021; 43:312-318.
06.05.2021Secondary attack rates from asymptomatic and symptomatic influenza virus shedders in hospitals: Results from the TransFLUas influenza transmission study.
06.05.2021Infect Control Hosp Epidemiol 2021; 43:312-318
Tamò Raphaël, Turk Teja, Böni Jürg, Kouyos Roger D, Schmutz Stefan, Huber Michael, Shah Cyril, Bischoff-Ferrari Heike A, Distler Oliver, Battegay Edouard, Giovanoli Pietro, Guckenberger Matthias, Kohler Malcolm, Müller Rouven, Petry Heidi, Ruschitzka Frank, McGeer Allison, Sax Hugo, Weber Rainer, Trkola Alexandra, Kuster Stefan
HCV Genetic Diversity Can Be Used to Infer Infection Recency and Time since Infection
Carlisle L, Günthard H, Bernasconi E, Vernazza P, Stoeckle M, Cavassini M, Nguyen A, Yerly S, Rauch A, Salazar-Vizcaya L, Fehr J, Braun D, Huber M, Böni J, Shah C, Mbunkah H, Metzner K, Turk T, Kouyos R. HCV Genetic Diversity Can Be Used to Infer Infection Recency and Time since Infection. Viruses 2020; 12
31.10.2020HCV Genetic Diversity Can Be Used to Infer Infection Recency and Time since Infection
31.10.2020Viruses 2020; 12
Carlisle Louisa A, Günthard Huldrych F, Bernasconi Enos, Vernazza Pietro, Stoeckle Marcel, Cavassini Matthias, Nguyen Aude, Yerly Sabine, Rauch Andri, Salazar-Vizcaya Luisa, Fehr Jan, Braun Dominique L, Huber Michael, Böni Jürg, Shah Cyril, Mbunkah Herbert A, Metzner Karin J, Turk Teja, Kouyos Roger D
Predictors of virological failure and time to viral suppression of first line integrase inhibitor based antiretroviral treatment
Pyngottu A, Günthard H, Bernasconi E, Vernazza P, Furrer H, Stöckle M, Cavassini M, Calmy A, Yerly S, Perreau M, Hirsch H, Huber M, Kouyos R, Scherrer A, Swiss HIV Cohort Study. Predictors of virological failure and time to viral suppression of first line integrase inhibitor based antiretroviral treatment. Clin Infect Dis 2020
24.10.2020Predictors of virological failure and time to viral suppression of first line integrase inhibitor based antiretroviral treatment
24.10.2020Clin Infect Dis 2020
Pyngottu Ashima, Günthard Huldrych F, Bernasconi Enos, Vernazza Pietro, Furrer Hansjakob, Stöckle Marcel, Cavassini Matthias, Calmy Alexandra, Yerly Sabine, Perreau Matthieu, Hirsch Hans, Huber Michael, Kouyos Roger, Scherrer Alexandra U, Swiss HIV Cohort Study
Tracing HIV-1 strains that imprint broadly neutralizing antibody responses
Kouyos R, Cavassini M, Bernasconi E, Hoffmann M, Calmy A, Battegay M, Rauch A, Yerly S, Aubert V, Klimkait T, Böni J, Metzner K, Günthard H, Trkola A, Chave J, Kuster H, Leemann C, Rusert P, Kadelka C, Huber M, Marzel A, Ebner H, Schanz M, Liechti T, Friedrich N, Braun D, Scherrer A, Weber J, Uhr T, Baumann N, Swiss HIV Cohort Study. Tracing HIV-1 strains that imprint broadly neutralizing antibody responses. Nature 2018; 561:406-410.
10.09.2018Tracing HIV-1 strains that imprint broadly neutralizing antibody responses
10.09.2018Nature 2018; 561:406-410
Kouyos Roger D, Cavassini Matthias, Bernasconi Enos, Hoffmann Matthias, Calmy Alexandra, Battegay Manuel, Rauch Andri, Yerly Sabine, Aubert Vincent, Klimkait Thomas, Böni Jürg, Metzner Karin J, Günthard Huldrych F, Trkola Alexandra, Chave Jean-Philippe, Kuster Herbert, Leemann Christine, Rusert Peter, Kadelka Claus, Huber Michael, Marzel Alex, Ebner Hanna, Schanz Merle, Liechti Thomas, Friedrich Nikolas, Braun Dominique L, Scherrer Alexandra U, Weber Jacqueline, Uhr Therese, Baumann Nicolas S, Swiss HIV Cohort Study
Distinct, IgG1-driven antibody response landscapes demarcate individuals with broadly HIV-1 neutralizing activity
Kadelka C, Bernasconi E, Hoffmann M, Calmy A, Battegay M, Rauch A, Yerly S, Aubert V, Klimkait T, Böni J, Kouyos R, Günthard H, Trkola A, Cavassini M, Misselwitz B, Liechti T, Ebner H, Schanz M, Rusert P, Friedrich N, Stiegeler E, Braun D, Huber M, Scherrer A, Weber J, Uhr T, Kuster H, Swiss HIV Cohort Study. Distinct, IgG1-driven antibody response landscapes demarcate individuals with broadly HIV-1 neutralizing activity. J Exp Med 2018; 215:1589-1608.
24.05.2018Distinct, IgG1-driven antibody response landscapes demarcate individuals with broadly HIV-1 neutralizing activity
24.05.2018J Exp Med 2018; 215:1589-1608
Kadelka Claus, Bernasconi Enos, Hoffmann Matthias, Calmy Alexandra, Battegay Manuel, Rauch Andri, Yerly Sabine, Aubert Vincent, Klimkait Thomas, Böni Jürg, Kouyos Roger D, Günthard Huldrych F, Trkola Alexandra, Cavassini Matthias, Misselwitz Benjamin, Liechti Thomas, Ebner Hanna, Schanz Merle, Rusert Peter, Friedrich Nikolas, Stiegeler Emanuel, Braun Dominique L, Huber Michael, Scherrer Alexandra U, Weber Jacqueline, Uhr Therese, Kuster Herbert, Swiss HIV Cohort Study
Determinants of HIV-1 broadly neutralizing antibody induction
Rusert P, Bernasconi E, Hoffmann M, Calmy A, Battegay M, Rauch A, Yerly S, Aubert V, Klimkait T, Böni J, Fellay J, Regoes R, Günthard H, Trkola A, Cavassini M, Kuster H, Kouyos R, Kadelka C, Ebner H, Schanz M, Huber M, Braun D, Hozé N, Scherrer A, Magnus C, Weber J, Uhr T, Cippa V, Thorball C. Determinants of HIV-1 broadly neutralizing antibody induction. Nat Med 2016
26.09.2016Determinants of HIV-1 broadly neutralizing antibody induction
26.09.2016Nat Med 2016
Rusert Peter, Bernasconi Enos, Hoffmann Matthias, Calmy Alexandra, Battegay Manuel, Rauch Andri, Yerly Sabine, Aubert Vincent, Klimkait Thomas, Böni Jürg, Fellay Jacques, Regoes Roland R, Günthard Huldrych F, Trkola Alexandra, Cavassini Matthias, Kuster Herbert, Kouyos Roger D, Kadelka Claus, Ebner Hanna, Schanz Merle, Huber Michael, Braun Dominique L, Hozé Nathanael, Scherrer Alexandra, Magnus Carsten, Weber Jacqueline, Uhr Therese, Cippa Valentina, Thorball Christian W