Swiss HIV Cohort Study
Risk Factors and Incidence of Sexually Transmitted Infections in the Swiss HIV Cohort Study.
Bosetti D, Mugglin C, Calmy A, Cavassini M, Stöckle M, Braun D, Notter J, Haerry D, Hampel B, Kovari H, Bernasconi E, Wandeler G, Rauch A, Swiss HIV Cohort Study. Risk Factors and Incidence of Sexually Transmitted Infections in the Swiss HIV Cohort Study. Open Forum Infect Dis 2022; 9:ofac592.
16.11.2022Risk Factors and Incidence of Sexually Transmitted Infections in the Swiss HIV Cohort Study.
16.11.2022Open Forum Infect Dis 2022; 9:ofac592
Bosetti Davide G, Mugglin Catrina, Calmy Alexandra, Cavassini Matthias, Stöckle Marcel, Braun Dominique, Notter Julia, Haerry David, Hampel Benjamin, Kovari Helen, Bernasconi Enos, Wandeler Gilles, Rauch Andri, Swiss HIV Cohort Study
Sustained Effect on Hepatitis C Elimination Among Men Who Have Sex With Men in the Swiss HIV Cohort Study: A Systematic Re-Screening for Hepatitis C RNA Two Years Following a Nation-Wide Elimination Program.
Kusejko K, Salazar-Vizcaya L, Shah C, Stöckle M, Béguelin C, Schmid P, Ongaro M, Darling K, Bernasconi E, Rauch A, Kouyos R, Günthard H, Böni J, Fehr J, Braun D, Swiss HIV Cohort Study. Sustained Effect on Hepatitis C Elimination Among Men Who Have Sex With Men in the Swiss HIV Cohort Study: A Systematic Re-Screening for Hepatitis C RNA Two Years Following a Nation-Wide Elimination Program. Clin Infect Dis 2022; 75:1723-1731.
14.11.2022Sustained Effect on Hepatitis C Elimination Among Men Who Have Sex With Men in the Swiss HIV Cohort Study: A Systematic Re-Screening for Hepatitis C RNA Two Years Following a Nation-Wide Elimination Program.
14.11.2022Clin Infect Dis 2022; 75:1723-1731
Kusejko Katharina, Salazar-Vizcaya Luisa, Shah Cyril, Stöckle Marcel, Béguelin Charles, Schmid Patrick, Ongaro Marie, Darling Katherine, Bernasconi Enos, Rauch Andri, Kouyos Roger D, Günthard Huldrych F, Böni Jürg, Fehr Jan S, Braun Dominique L, Swiss HIV Cohort Study
Unsupervised machine learning predicts future sexual behaviour and sexually transmitted infections among HIV-positive men who have sex with men.
Andresen S, Balakrishna S, Mugglin C, Schmidt A, Braun D, Marzel A, Doco Lecompte T, Darling K, Roth J, Schmid P, Bernasconi E, Günthard H, Rauch A, Kouyos R, Salazar-Vizcaya L, Swiss HIV Cohort Study. Unsupervised machine learning predicts future sexual behaviour and sexually transmitted infections among HIV-positive men who have sex with men. PLoS Comput Biol 2022; 18:e1010559.
27.10.2022Unsupervised machine learning predicts future sexual behaviour and sexually transmitted infections among HIV-positive men who have sex with men.
27.10.2022PLoS Comput Biol 2022; 18:e1010559
Andresen Sara, Balakrishna Suraj, Mugglin Catrina, Schmidt Axel J, Braun Dominique L, Marzel Alex, Doco Lecompte Thanh, Darling Katharine Ea, Roth Jan A, Schmid Patrick, Bernasconi Enos, Günthard Huldrych F, Rauch Andri, Kouyos Roger D, Salazar-Vizcaya Luisa, Swiss HIV Cohort Study
A Systematic Molecular Epidemiology Screen Reveals Numerous Human Immunodeficiency Virus (HIV) Type 1 Superinfections in the Swiss HIV Cohort Study.
Chaudron S, Leemann C, Kusejko K, Nguyen H, Tschumi N, Marzel A, Huber M, Böni J, Perreau M, Klimkait T, Yerly S, Ramette A, Hirsch H, Rauch A, Calmy A, Vernazza P, Bernasconi E, Cavassini M, Metzner K, Kouyos R, Günthard H, Swiss HIV Cohort Study. A Systematic Molecular Epidemiology Screen Reveals Numerous Human Immunodeficiency Virus (HIV) Type 1 Superinfections in the Swiss HIV Cohort Study. J Infect Dis 2022; 226:1256-1266.
28.09.2022A Systematic Molecular Epidemiology Screen Reveals Numerous Human Immunodeficiency Virus (HIV) Type 1 Superinfections in the Swiss HIV Cohort Study.
28.09.2022J Infect Dis 2022; 226:1256-1266
Chaudron Sandra E, Leemann Christine, Kusejko Katharina, Nguyen Huyen, Tschumi Nadine, Marzel Alex, Huber Michael, Böni Jürg, Perreau Matthieu, Klimkait Thomas, Yerly Sabine, Ramette Alban, Hirsch Hans H, Rauch Andri, Calmy Alexandra, Vernazza Pietro, Bernasconi Enos, Cavassini Matthias, Metzner Karin J, Kouyos Roger D, Günthard Huldrych F, Swiss HIV Cohort Study
Author Correction: Increased prevalence of clonal hematopoiesis of indeterminate potential amongst people living with HIV.
Bick A, Popadin K, Thorball C, Uddin M, Zanni M, Yu B, Cavassini M, Rauch A, Tarr P, Schmid P, Bernasconi E, Günthard H, Libby P, Boerwinkle E, McLaren P, Ballantyne C, Grinspoon S, Natarajan P, Fellay J, Swiss HIV Cohort Study. Author Correction: Increased prevalence of clonal hematopoiesis of indeterminate potential amongst people living with HIV. Sci Rep 2022; 12:11638.
08.07.2022Author Correction: Increased prevalence of clonal hematopoiesis of indeterminate potential amongst people living with HIV.
08.07.2022Sci Rep 2022; 12:11638
Bick Alexander G, Popadin Konstantin, Thorball Christian W, Uddin Mesbah, Zanni Markella V, Yu Bing, Cavassini Matthias, Rauch Andri, Tarr Philip, Schmid Patrick, Bernasconi Enos, Günthard Huldrych F, Libby Peter, Boerwinkle Eric, McLaren Paul J, Ballantyne Christie M, Grinspoon Steven, Natarajan Pradeep, Fellay Jacques, Swiss HIV Cohort Study
Impact of Latent Tuberculosis on Diabetes.
Tepekule B, Kusejko K, Zeeb M, Tarr P, Calmy A, Battegay M, Furrer H, Cavassini M, Bernasconi E, Notter J, Günthard H, Nemeth J, Kouyos R, Swiss HIV Cohort Study. Impact of Latent Tuberculosis on Diabetes. J Infect Dis 2022; 225:2229-2234.
15.06.2022Impact of Latent Tuberculosis on Diabetes.
15.06.2022J Infect Dis 2022; 225:2229-2234
Tepekule Burcu, Kusejko Katharina, Zeeb Marius, Tarr Philip E, Calmy Alexandra, Battegay Manuel, Furrer Hansjakob, Cavassini Matthias, Bernasconi Enos, Notter Julia, Günthard Huldrych F, Nemeth Johannes, Kouyos Roger D, Swiss HIV Cohort Study
Telomere Length Declines In Persons Living With HIV Before Antiretroviral Therapy Start But Not After Viral Suppression: A Longitudinal Study Over >17 Years
Schoepf I, Bernasconi E, Cavassini M, Buvelot H, Arribas J, Kouyos R, Fellay J, Günthard H, Tarr P, Seneghini M, Marzolini C, Thurnheer C, Thorball C, Ledergerber B, Kootstra N, Reiss P, Raffenberg M, Engel T, Braun D, Hasse B, Swiss HIV Cohort Study. Telomere Length Declines In Persons Living With HIV Before Antiretroviral Therapy Start But Not After Viral Suppression: A Longitudinal Study Over >17 Years. J Infect Dis 2021
15.12.2021Telomere Length Declines In Persons Living With HIV Before Antiretroviral Therapy Start But Not After Viral Suppression: A Longitudinal Study Over >17 Years
15.12.2021J Infect Dis 2021
Schoepf Isabella C, Bernasconi Enos, Cavassini Matthias, Buvelot Hélène, Arribas José R, Kouyos Roger D, Fellay Jacques, Günthard Huldrych F, Tarr Philip E, Seneghini Marco, Marzolini Catia, Thurnheer Christine, Thorball Christian W, Ledergerber Bruno, Kootstra Neeltje A, Reiss Peter, Raffenberg Marieke, Engel Tanja, Braun Dominique L, Hasse Barbara, Swiss HIV Cohort Study
Identifying and Characterizing Trans women in the Swiss HIV Cohort Study as an Epidemiologically Distinct Risk Group
Nguyen H, Leuzinger K, Perreau M, Scherrer A, Ramette A, Yerly S, Günthard H, Kouyos R, Kusejko K, Huber M, Rudolph H, Fellay J, Hampel B, Nuñez D, Battegay M, Hachfeld A, Bernasconi E, Calmy A, Cavassini M, Vernazza P, Swiss HIV Cohort Study. Identifying and Characterizing Trans women in the Swiss HIV Cohort Study as an Epidemiologically Distinct Risk Group. Clin Infect Dis 2021
20.07.2021Identifying and Characterizing Trans women in the Swiss HIV Cohort Study as an Epidemiologically Distinct Risk Group
20.07.2021Clin Infect Dis 2021
Nguyen Huyen, Leuzinger Karoline, Perreau Matthieu, Scherrer Alexandra, Ramette Alban Nicolas, Yerly Sabine, Günthard Huldrych F, Kouyos Roger D, Kusejko Katharina, Huber Michael, Rudolph Hannes, Fellay Jacques, Hampel Benjamin, Nuñez David Garcia, Battegay Manuel, Hachfeld Anna, Bernasconi Enos, Calmy Alexandra, Cavassini Matthias, Vernazza Pietro, Swiss HIV Cohort Study
Increasing Frequency and Transmission of HIV-1 Non-B Subtypes among Men Who Have Sex with Men in the Swiss HIV Cohort Study
Duran Ramirez J, Kouyos R, Günthard H, Bernasconi E, Vernazza P, Furrer H, Stöckle M, Cavassini M, Yerly S, Ramette A, Perreau M, Hirsch H, Huber M, Chaudron S, Kusejko K, Nguyen H, Ballouz T, Swiss HIV Cohort Study. Increasing Frequency and Transmission of HIV-1 Non-B Subtypes among Men Who Have Sex with Men in the Swiss HIV Cohort Study. J Infect Dis 2021
14.07.2021Increasing Frequency and Transmission of HIV-1 Non-B Subtypes among Men Who Have Sex with Men in the Swiss HIV Cohort Study
14.07.2021J Infect Dis 2021
Duran Ramirez Jessy J, Kouyos Roger D, Günthard Huldrych F, Bernasconi Enos, Vernazza Pietro, Furrer Hansjakob, Stöckle Marcel, Cavassini Matthias, Yerly Sabine, Ramette Alban, Perreau Matthieu, Hirsch Hans H, Huber Michael, Chaudron Sandra E, Kusejko Katharina, Nguyen Huyen, Ballouz Tala, Swiss HIV Cohort Study
Systematic screening of viral and human genetic variation identifies antiretroviral resistance and immune escape link
Nguyen H, Kouyos R, Günthard H, Bernasconi E, Kahlert C, Cavassini M, Battegay M, Thurnheer M, Kusejko K, Hirsch H, Perreau M, Yerly S, Böni J, Fellay J, Thorball C, Swiss HIV Cohort Study. Systematic screening of viral and human genetic variation identifies antiretroviral resistance and immune escape link. Elife 2021; 10
01.06.2021Systematic screening of viral and human genetic variation identifies antiretroviral resistance and immune escape link
01.06.2021Elife 2021; 10
Nguyen Huyen, Kouyos Roger D, Günthard Huldrych F, Bernasconi Enos, Kahlert Christian, Cavassini Matthias, Battegay Manuel, Thurnheer Maria Christine, Kusejko Katharina, Hirsch Hans H, Perreau Matthieu, Yerly Sabine, Böni Jürg, Fellay Jacques, Thorball Christian Wandell, Swiss HIV Cohort Study
Author Correction: The influence of human genetic variation on Epstein-Barr virus sequence diversity
Rüeger S, Fellay J, Zdobnov E, Breuer J, Morfopoulou S, Depledge D, Rauch A, Kahlert C, Günthard H, Cavassini M, Bernasconi E, Khanna N, Naret O, Lawless D, McLaren P, Loetscher A, Hammer C, Swiss HIV Cohort Study. Author Correction: The influence of human genetic variation on Epstein-Barr virus sequence diversity. Sci Rep 2021; 11:8946.
20.04.2021Author Correction: The influence of human genetic variation on Epstein-Barr virus sequence diversity
20.04.2021Sci Rep 2021; 11:8946
Rüeger Sina, Fellay Jacques, Zdobnov Evgeny, Breuer Judith, Morfopoulou Sofia, Depledge Daniel P, Rauch Andri, Kahlert Christian, Günthard Huldrych F, Cavassini Matthias, Bernasconi Enos, Khanna Nina, Naret Olivier, Lawless Dylan, McLaren Paul J, Loetscher Alexis, Hammer Christian, Swiss HIV Cohort Study
Weight and Metabolic Changes After Switching From Tenofovir Disoproxil Fumarate to Tenofovir Alafenamide in People Living With HIV : A Cohort Study
Surial B, Rauch A, Wandeler G, Ledergerber B, Furrer H, Tarr P, Schmid P, Bernasconi E, Stöckle M, Günthard H, Cavassini M, Calmy A, Mugglin C, Swiss HIV Cohort Study. Weight and Metabolic Changes After Switching From Tenofovir Disoproxil Fumarate to Tenofovir Alafenamide in People Living With HIV : A Cohort Study. Ann Intern Med 2021; 174:758-767.
16.03.2021Weight and Metabolic Changes After Switching From Tenofovir Disoproxil Fumarate to Tenofovir Alafenamide in People Living With HIV : A Cohort Study
16.03.2021Ann Intern Med 2021; 174:758-767
Surial Bernard, Rauch Andri, Wandeler Gilles, Ledergerber Bruno, Furrer Hansjakob, Tarr Philip E, Schmid Patrick, Bernasconi Enos, Stöckle Marcel, Günthard Huldrych F, Cavassini Matthias, Calmy Alexandra, Mugglin Catrina, Swiss HIV Cohort Study
The influence of human genetic variation on Epstein-Barr virus sequence diversity
Rüeger S, Fellay J, Zdobnov E, Breuer J, Morfopoulou S, Depledge D, Rauch A, Kahlert C, Günthard H, Cavassini M, Bernasconi E, Khanna N, Naret O, Lawless D, McLaren P, Loetscher A, Hammer C, Swiss HIV Cohort Study. The influence of human genetic variation on Epstein-Barr virus sequence diversity. Sci Rep 2021; 11:4586.
25.02.2021The influence of human genetic variation on Epstein-Barr virus sequence diversity
25.02.2021Sci Rep 2021; 11:4586
Rüeger Sina, Fellay Jacques, Zdobnov Evgeny, Breuer Judith, Morfopoulou Sofia, Depledge Daniel P, Rauch Andri, Kahlert Christian, Günthard Huldrych F, Cavassini Matthias, Bernasconi Enos, Khanna Nina, Naret Olivier, Lawless Dylan, McLaren Paul J, Loetscher Alexis, Hammer Christian, Swiss HIV Cohort Study
Data linkage to evaluate the long-term risk of HIV infection in individuals seeking post-exposure prophylaxis
Hovaguimian F, Riou J, Spoerri A, Schmidlin K, Balakrishna S, Braun D, Rampini S, Fehr J, Kouyos R, Scherrer A, Heinrich H, Günthard H, Hauser C, Conen A, Bernasconi E, Calmy A, Cavassini M, Seneghini M, Marzel A, Swiss HIV Cohort Study. Data linkage to evaluate the long-term risk of HIV infection in individuals seeking post-exposure prophylaxis. Nat Commun 2021; 12:1219.
22.02.2021Data linkage to evaluate the long-term risk of HIV infection in individuals seeking post-exposure prophylaxis
22.02.2021Nat Commun 2021; 12:1219
Hovaguimian Frédérique, Riou Julien, Spoerri Adrian, Schmidlin Kurt, Balakrishna Suraj, Braun Dominique L, Rampini Silvana K, Fehr Jan S, Kouyos Roger D, Scherrer Alexandra, Heinrich Henriette, Günthard Huldrych F, Hauser Christoph, Conen Anna, Bernasconi Enos, Calmy Alexandra, Cavassini Matthias, Seneghini Marco, Marzel Alex, Swiss HIV Cohort Study
Coronary Artery Disease-Associated and Longevity-Associated Polygenic Risk Scores for Prediction of Coronary Artery Disease Events in Persons Living With Human Immunodeficiency Virus: The Swiss HIV Cohort Study
Schoepf I, Tarr P, Fellay J, Günthard H, Kouyos R, Buvelot H, Cavassini M, Bernasconi E, Seneghini M, Thurnheer C, Marzolini C, Hasse B, Reiss P, Kootstra N, Raffenberg M, Engel T, Ledergerber B, Thorball C, Swiss HIV Cohort Study. Coronary Artery Disease-Associated and Longevity-Associated Polygenic Risk Scores for Prediction of Coronary Artery Disease Events in Persons Living With Human Immunodeficiency Virus: The Swiss HIV Cohort Study. Clin Infect Dis 2021; 73:1597-1604.
02.01.2021Coronary Artery Disease-Associated and Longevity-Associated Polygenic Risk Scores for Prediction of Coronary Artery Disease Events in Persons Living With Human Immunodeficiency Virus: The Swiss HIV Cohort Study
02.01.2021Clin Infect Dis 2021; 73:1597-1604
Schoepf Isabella C, Tarr Philip E, Fellay Jacques, Günthard Huldrych F, Kouyos Roger, Buvelot Hélène, Cavassini Matthias, Bernasconi Enos, Seneghini Marco, Thurnheer Christine, Marzolini Catia, Hasse Barbara, Reiss Peter, Kootstra Neeltje A, Raffenberg Marieke, Engel Tanja, Ledergerber Bruno, Thorball Christian W, Swiss HIV Cohort Study
Using longitudinally sampled viral nucleotide sequences to characterize the drivers of HIV-1 transmission
Reichmuth M, Kouyos R, Kusejko K, Günthard H, Bernasconi E, Cavassini M, Vernazza P, Ramette A, Hauser C, Hirsch H, Yerly S, Klimkait T, Perreau M, Metzner K, Böni J, Nguyen H, Bachmann N, Chaudron S, Swiss HIV Cohort Study. Using longitudinally sampled viral nucleotide sequences to characterize the drivers of HIV-1 transmission. HIV Med 2020
25.12.2020Using longitudinally sampled viral nucleotide sequences to characterize the drivers of HIV-1 transmission
25.12.2020HIV Med 2020
Reichmuth M L, Kouyos R D, Kusejko K, Günthard H F, Bernasconi E, Cavassini M, Vernazza Pietro, Ramette A, Hauser C, Hirsch H H, Yerly S, Klimkait T, Perreau M, Metzner K J, Böni J, Nguyen H, Bachmann N, Chaudron S E, Swiss HIV Cohort Study
Diagnosis of latent tuberculosis infection is associated with reduced HIV viral load and lower risk for opportunistic infections in people living with HIV
Kusejko K, Nemeth J, Kouyos R, Hoffmann M, Vernazza P, Bernasconi E, Vetter P, Furrer H, Khanna N, Darling K, Zens K, Olson G, Günthard H, Swiss HIV Cohort Study. Diagnosis of latent tuberculosis infection is associated with reduced HIV viral load and lower risk for opportunistic infections in people living with HIV. PLoS Biol 2020; 18:e3000963.
07.12.2020Diagnosis of latent tuberculosis infection is associated with reduced HIV viral load and lower risk for opportunistic infections in people living with HIV
07.12.2020PLoS Biol 2020; 18:e3000963
Kusejko Katharina, Nemeth Johannes, Kouyos Roger D, Hoffmann Matthias, Vernazza Pietro, Bernasconi Enos, Vetter Pauline, Furrer Hansjakob, Khanna Nina, Darling Katharine, Zens Kyra, Olson Gregory S, Günthard Huldrych F, Swiss HIV Cohort Study
Host Genomics of the HIV-1 Reservoir Size and Its Decay Rate During Suppressive Antiretroviral Treatment
Thorball C, Klimkait T, Yerly S, Battegay M, Rauch A, Schmid P, Bernasconi E, Cavassini M, Kouyos R, Günthard H, Metzner K, Fellay J, Perreau M, Böni J, Wieser M, Borghesi A, Bachmann N, Von Siebenthal C, Vongrad V, Turk T, Neumann K, Beerenwinkel N, Bogojeska J, Roth V, Kok Y, Parbhoo S, Swiss HIV Cohort Study. Host Genomics of the HIV-1 Reservoir Size and Its Decay Rate During Suppressive Antiretroviral Treatment. J Acquir Immune Defic Syndr 2020; 85:517-524.
01.12.2020Host Genomics of the HIV-1 Reservoir Size and Its Decay Rate During Suppressive Antiretroviral Treatment
01.12.2020J Acquir Immune Defic Syndr 2020; 85:517-524
Thorball Christian W, Klimkait Thomas, Yerly Sabine, Battegay Manuel, Rauch Andri, Schmid Patrick, Bernasconi Enos, Cavassini Matthias, Kouyos Roger D, Günthard Huldrych F, Metzner Karin J, Fellay Jacques, Perreau Matthieu, Böni Jürg, Wieser Mario, Borghesi Alessandro, Bachmann Nadine, Von Siebenthal Chantal, Vongrad Valentina, Turk Teja, Neumann Kathrin, Beerenwinkel Niko, Bogojeska Jasmina, Roth Volker, Kok Yik Lim, Parbhoo Sonali, Swiss HIV Cohort Study
Rapid Progression of Kidney Dysfunction in Swiss People Living with HIV: Contribution of Polygenic Risk Score and D:A:D Clinical Risk Score
Dietrich L, Tarr P, Ledergerber B, Fellay J, Buvelot H, Darling K, Bernasconi E, Schmid P, Maja W, Thurnheer M, Hasse B, Burkhalter F, Ryom L, Thorball C, Swiss HIV Cohort Study. Rapid Progression of Kidney Dysfunction in Swiss People Living with HIV: Contribution of Polygenic Risk Score and D:A:D Clinical Risk Score. J Infect Dis 2020
05.11.2020Rapid Progression of Kidney Dysfunction in Swiss People Living with HIV: Contribution of Polygenic Risk Score and D:A:D Clinical Risk Score
05.11.2020J Infect Dis 2020
Dietrich Léna G, Tarr Philip E, Ledergerber Bruno, Fellay Jacques, Buvelot Hélène, Darling Kathrine E A, Bernasconi Enos, Schmid Patrick, Maja Weisser, Thurnheer Maria Christine, Hasse Barbara, Burkhalter Felix, Ryom Lene, Thorball Christian W, Swiss HIV Cohort Study
Heritability of the HIV-1 reservoir size and decay under long-term suppressive ART
Wan C, Yerly S, Battegay M, Walti L, Calmy A, Vernazza P, Bernasconi E, Cavassini M, Metzner K, Günthard H, Kouyos R, Klimkait T, Perreau M, Böni J, Bachmann N, Mitov V, Blanquart F, Céspedes S, Turk T, Neumann K, Beerenwinkel N, Bogojeska J, Fellay J, Roth V, Swiss HIV Cohort Study. Heritability of the HIV-1 reservoir size and decay under long-term suppressive ART. Nat Commun 2020; 11:5542.
02.11.2020Heritability of the HIV-1 reservoir size and decay under long-term suppressive ART
02.11.2020Nat Commun 2020; 11:5542
Wan Chenjie, Yerly Sabine, Battegay Manuel, Walti Laura, Calmy Alexandra, Vernazza Pietro, Bernasconi Enos, Cavassini Matthias, Metzner Karin J, Günthard Huldrych F, Kouyos Roger D, Klimkait Thomas, Perreau Matthieu, Böni Jürg, Bachmann Nadine, Mitov Venelin, Blanquart François, Céspedes Susana Posada, Turk Teja, Neumann Kathrin, Beerenwinkel Niko, Bogojeska Jasmina, Fellay Jacques, Roth Volker, Swiss HIV Cohort Study